Which car is most likely to be reliable and trouble free? Assume similar miles and good maintenance histories for both.
They were two really excellent engines. I'd probably go with the Fusion due to the current obscene price of gasoline.
Here are the problems I am aware of with both.
Ford: EPAS electric steering rack tends to break (everyone I know with this generation has encountered this problem), 6F35 was known to shift flare, overall most people with the 2.5 Duratec seem to have good results though a former friend had one blow at 82k miles but I don't know how religious he was or wasn't with maintenance. He wasn't a car guy.