I cant see a reason for it. There are full timers that may not start their rig for months. Those things are not being started every 15 days setting in a dealers lot either. If it's a concern from Ford about the VVT, I can only say that my SuperDuty sets from October through April, and might get started 2 or 3 times tops, and there have been times it has set the whole 5 months. No turbo issues.
I find it interesting they call out cycling through the gears as well, could it be they are concerned about a seal drying out and leaking?
I think if you keep the tank full to minimize moisture, (buy from a place that is busy on the last fill), dope the fuel for extended storage, (there are lots of options here), and keep the batteries topped off you are fine.